Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Cmaq_1908Permease; KEGG: sso:SSO3021 Permease. (606 aa)    
Predicted Functional Partners:
Cmaq_1248
PFAM: transposase IS605 OrfB; Protein of unknown function DUF1225; KEGG: sso:SSO0842 transposase ISC1476.
  
     0.729
Cmaq_0817
PFAM: amino acid permease-associated region; KEGG: sso:SSO2549 amino acid transporter, putative.
  
     0.683
Cmaq_1176
KEGG: sso:SSO1345 hypothetical protein.
  
     0.679
Cmaq_1638
PFAM: protein of unknown function DUF608; KEGG: sso:SSO2674 hypothetical protein.
  
     0.669
Cmaq_0405
TIGRFAM: transposase, IS605 OrfB family; PFAM: transposase IS605 OrfB; Protein of unknown function DUF1225; KEGG: sto:ST2552 hypothetical protein.
  
     0.658
Cmaq_0859
PFAM: major facilitator superfamily MFS_1; KEGG: sso:SSO1361 transport membrane protein (permease).
  
     0.657
Cmaq_1276
PFAM: protein of unknown function DUF608; KEGG: sso:SSO1948 hypothetical protein.
  
     0.635
Cmaq_1350
KEGG: sai:Saci_1158 hypothetical protein.
  
     0.619
Cmaq_0433
PFAM: Xylose isomerase domain protein TIM barrel; KEGG: sso:SSO3029 hypothetical protein.
  
     0.569
Cmaq_1477
PFAM: Protein of unknown function DUF1626; KEGG: sto:ST1602 hypothetical protein.
  
     0.549
Your Current Organism:
Caldivirga maquilingensis
NCBI taxonomy Id: 397948
Other names: C. maquilingensis IC-167, Caldivirga maquilingensis DSM 13496, Caldivirga maquilingensis IC-167, Caldivirga maquilingensis JCM 10307, Caldivirga maquilingensis str. IC-167, Caldivirga maquilingensis strain IC-167
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