STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Cmaq_1925PFAM: transcriptional regulator PadR family protein; KEGG: pfu:PF1476 hypothetical protein. (118 aa)    
Predicted Functional Partners:
Cmaq_1653
PFAM: Myo-inositol-1-phosphate synthase; Myo-inositol-1-phosphate synthase GAPDH domain protein; KEGG: pis:Pisl_1718 myo-inositol-1-phosphate synthase.
 
   
 0.767
Cmaq_1924
PFAM: CDP-alcohol phosphatidyltransferase; KEGG: sso:SSO0556 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, putataive; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
       0.691
Cmaq_1659
PFAM: Sjogrens syndrome scleroderma autoantigen 1; KEGG: pis:Pisl_1652 Sjogrens syndrome scleroderma autoantigen 1.
  
     0.446
Cmaq_1853
PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: mtp:Mthe_0018 radical SAM domain protein.
 
     0.444
pcn-2
Proliferating cell nuclear antigen PcnA; Sliding clamp subunit that acts as a moving platform for DNA processing. Responsible for tethering the catalytic subunit of DNA polymerase and other proteins to DNA during high-speed replication.
 
   
 0.434
Cmaq_1751
KEGG: pai:PAE1446 hypothetical protein.
  
     0.431
Cmaq_0873
SMART: actin/actin family protein; KEGG: pis:Pisl_0887 actin/actin family protein.
  
     0.429
Cmaq_1054
KEGG: pai:PAE0705 hypothetical protein.
 
     0.422
cobB
Silent information regulator protein Sir2; NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form. Deacetylates the N-terminal lysine residue of Alba, the major archaeal chromatin protein and that, in turn, increases Alba's DNA binding affinity, thereby repressing transcription; Belongs to the sirtuin family. Class U subfamily.
  
    0.410
Cmaq_1251
Heavy metal translocating P-type ATPase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: pis:Pisl_1442 heavy metal translocating P-type ATPase.
  
  
 0.406
Your Current Organism:
Caldivirga maquilingensis
NCBI taxonomy Id: 397948
Other names: C. maquilingensis IC-167, Caldivirga maquilingensis DSM 13496, Caldivirga maquilingensis IC-167, Caldivirga maquilingensis JCM 10307, Caldivirga maquilingensis str. IC-167, Caldivirga maquilingensis strain IC-167
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