Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Cmaq_1940PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: pto:PTO1253 ferredoxin. (651 aa)    
Predicted Functional Partners:
Cmaq_1937
PFAM: cytochrome c oxidase subunit I; KEGG: nha:Nham_2711 cytochrome c oxidase, subunit I; Belongs to the heme-copper respiratory oxidase family.
     
 0.843
Cmaq_1939
PFAM: Cytochrome b/b6 domain; KEGG: sto:ST1667 hypothetical cytochrome b.
  
  
 0.823
Cmaq_1938
PFAM: Rieske [2Fe-2S] domain protein; KEGG: sto:ST1666 hypothetical Rieske iron-sulfur protein.
     
 0.818
Cmaq_1936
PFAM: cytochrome c oxidase subunit II; KEGG: neu:NE0684 possible cytochrome-c oxidase chain II.
     
 0.684
Cmaq_0304
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: pas:Pars_0647 4Fe-4S ferredoxin, iron-sulfur binding domain protein.
  
 
 0.570
Cmaq_0286
KEGG: pai:PAE3603 nitric oxide reductase, cytochrome b subunit.
  
  
 0.559
Cmaq_1934
KEGG: efa:EF1288 hypothetical protein.
       0.540
Cmaq_1935
Hypothetical protein; KEGG: tac:Ta1505 rusticyanin related protein.
       0.540
Cmaq_0648
Hypothetical protein.
  
  
 0.435
Cmaq_0272
TIGRFAM: adenylylsulfate reductase, beta subunit; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: rma:Rmag_0087 adenylylsulfate reductase, beta subunit.
  
 
 0.424
Your Current Organism:
Caldivirga maquilingensis
NCBI taxonomy Id: 397948
Other names: C. maquilingensis IC-167, Caldivirga maquilingensis DSM 13496, Caldivirga maquilingensis IC-167, Caldivirga maquilingensis JCM 10307, Caldivirga maquilingensis str. IC-167, Caldivirga maquilingensis strain IC-167
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