STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
Cmaq_1963Protein of unknown function DUF359; Catalyzes the GTP-dependent phosphorylation of the 3'- hydroxyl group of dephosphocoenzyme A to form coenzyme A (CoA). (200 aa)    
Predicted Functional Partners:
rps24e
Ribosomal protein S24E-like protein; KEGG: pis:Pisl_1895 transcriptional regulator, fis family; Belongs to the eukaryotic ribosomal protein eS24 family.
  
  
 0.953
Cmaq_1528
TIGRFAM: cytidyltransferase-related domain; PFAM: cytidylyltransferase; KEGG: pis:Pisl_1145 cytidyltransferase-related domain.
  
  
 0.933
Cmaq_1136
TIGRFAM: DNA-directed RNA polymerase; PFAM: RNA polymerase Rpb7-like; SMART: RNA binding S1 domain protein; KEGG: pis:Pisl_0922 RNA polymerase Rpb7-like protein.
 
    0.930
rps6e
PFAM: Ribosomal protein S6e; KEGG: pai:PAE1505 ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
 
    0.841
Cmaq_1962
PFAM: bifunctional deaminase-reductase domain protein; KEGG: pai:PAE2985 riboflavin specific deaminase, putative.
       0.794
spt4
DNA-directed RNA polymerase subunit E, RpoE2; Stimulates transcription elongation; Belongs to the archaeal Spt4 family.
 
    0.784
Cmaq_1961
PFAM: protein of unknown function UPF0153; KEGG: pis:Pisl_1173 hypothetical protein.
       0.639
rps27ae
PFAM: Ribosomal protein S27a; KEGG: pai:PAE2432 ribosomal protein S27; Belongs to the eukaryotic ribosomal protein eS31 family.
  
  
 0.618
Cmaq_1531
PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; Initiation factor eIF2 gamma, C terminal; KEGG: pis:Pisl_0078 protein synthesis factor, GTP-binding.
  
    0.563
rpl22
Ribosomal protein L22; This protein binds specifically to 23S rRNA. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome.
  
    0.546
Your Current Organism:
Caldivirga maquilingensis
NCBI taxonomy Id: 397948
Other names: C. maquilingensis IC-167, Caldivirga maquilingensis DSM 13496, Caldivirga maquilingensis IC-167, Caldivirga maquilingensis JCM 10307, Caldivirga maquilingensis str. IC-167, Caldivirga maquilingensis strain IC-167
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