Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Cmaq_1969PFAM: protein of unknown function DUF115; KEGG: pai:PAE2328 hypothetical protein. (221 aa)    
Predicted Functional Partners:
Cmaq_0184
TIGRFAM: dihydropteroate synthase; PFAM: dihydropteroate synthase DHPS; KEGG: tko:TK1161 dihydropteroate synthase.
 
  
 0.956
Cmaq_0970
PFAM: beta-lactamase domain protein; KEGG: pho:PH1079 hypothetical protein.
    
  0.902
Cmaq_0614
PFAM: Protein of unknown function DUF373; KEGG: pis:Pisl_1660 protein of unknown function DUF373.
 
     0.706
Cmaq_1970
PFAM: glycosyl transferase family 2; KEGG: tpe:Tpen_1727 glycosyl transferase, family 2.
 
     0.653
aroK
TIGRFAM: shikimate kinase; PFAM: GHMP kinase; KEGG: sso:SSO0308 shikimate kinase.
  
     0.600
tiaS
Domain of unknown function DUF1743; ATP-dependent agmatine transferase that catalyzes the formation of 2-agmatinylcytidine (agm2C) at the wobble position (C34) of tRNA(Ile2), converting the codon specificity from AUG to AUA.
  
     0.582
Cmaq_1551
PFAM: metallophosphoesterase; KEGG: pis:Pisl_0802 metallophosphoesterase.
  
     0.563
ribK
Protein of unknown function DUF120; Catalyzes the CTP-dependent phosphorylation of riboflavin (vitamin B2) to form flavin mononucleotide (FMN); Belongs to the archaeal riboflavin kinase family.
  
     0.555
Cmaq_1785
PFAM: GHMP kinase; KEGG: pis:Pisl_1364 hypothetical protein.
  
     0.554
Cmaq_1968
PFAM: major facilitator superfamily MFS_1; KEGG: sso:SSO3129 transporter.
       0.550
Your Current Organism:
Caldivirga maquilingensis
NCBI taxonomy Id: 397948
Other names: C. maquilingensis IC-167, Caldivirga maquilingensis DSM 13496, Caldivirga maquilingensis IC-167, Caldivirga maquilingensis JCM 10307, Caldivirga maquilingensis str. IC-167, Caldivirga maquilingensis strain IC-167
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