STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Cmaq_1978PFAM: sodium/calcium exchanger membrane region; KEGG: mta:Moth_0818 sodium/calcium exchanger membrane region. (334 aa)    
Predicted Functional Partners:
Cmaq_0470
PFAM: Carboxymuconolactone decarboxylase; Cupin domain protein; Cupin 2 conserved barrel domain protein; KEGG: rfr:Rfer_2441 carboxymuconolactone decarboxylase.
  
    0.737
Cmaq_1979
Hypothetical protein.
       0.532
Cmaq_1702
PFAM: sodium/hydrogen exchanger; KEGG: bld:BLi01940 putative Na+/H+ antiporter; RBL02356.
   
 
 0.451
Cmaq_0574
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: pis:Pisl_0176 4Fe-4S ferredoxin, iron-sulfur binding domain protein.
 
     0.448
Cmaq_1014
Citrate transporter; PFAM: Arsenical pump membrane protein; Citrate transporter; KEGG: sto:ST2255 hypothetical protein.
 
  
 0.433
Cmaq_1208
KEGG: sso:SSO2995 manganese transporter, putative.
 
  
 0.423
Cmaq_1334
PFAM: ribosomal RNA adenine methylase transferase; KEGG: pai:PAE3221 dimethyladenosine transferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.
 
   0.411
Cmaq_1536
TIGRFAM: protein-L-isoaspartate O-methyltransferase; PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; KEGG: pis:Pisl_0680 protein-L-isoaspartate O-methyltransferase.
  
    0.406
Your Current Organism:
Caldivirga maquilingensis
NCBI taxonomy Id: 397948
Other names: C. maquilingensis IC-167, Caldivirga maquilingensis DSM 13496, Caldivirga maquilingensis IC-167, Caldivirga maquilingensis JCM 10307, Caldivirga maquilingensis str. IC-167, Caldivirga maquilingensis strain IC-167
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