Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Cmaq_1983KEGG: ape:APE_0203.1 zinc transporter, ZIP family. (279 aa)    
Predicted Functional Partners:
Cmaq_0214
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
  
  
 0.684
Cmaq_1726
PFAM: cytochrome c biogenesis protein transmembrane region; KEGG: pis:Pisl_1607 cytochrome c biogenesis protein, transmembrane region.
  
    0.661
Cmaq_2000
PFAM: Protein of unknown function DUF54; KEGG: tko:TK1335 hypothetical protein; Belongs to the UPF0201 family.
 
     0.550
Cmaq_1296
TIGRFAM: carbamoyl-phosphate synthase, large subunit; PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain oligomerisation; Carbamoyl-phosphate synthetase large chain domain protein; RimK domain protein ATP-grasp; KEGG: pai:PAE0947 carbamoyl-phosphate synthase large subunit.
  
  
 0.500
Cmaq_0931
PFAM: fumarate lyase; KEGG: sto:ST2023 fumarate hydratase.
  
    0.495
Cmaq_1491
Carboxymethylenebutenolidase; PFAM: dienelactone hydrolase; KEGG: sai:Saci_1718 hypothetical protein.
 
  
 0.486
Cmaq_1981
PFAM: Protein of unknown function DUF655; KEGG: pis:Pisl_0580 putative nucleotide binding protein.
       0.437
Cmaq_1982
PFAM: RNA polymerase Rpb4; KEGG: pis:Pisl_0579 RNA polymerase Rpb4.
       0.437
Cmaq_1475
TIGRFAM: glucose-1-phosphate thymidyltransferase; PFAM: Nucleotidyl transferase; KEGG: ape:APE_1181 glucose-1-phosphate thymidylyltransferase.
 
   
 0.430
Cmaq_1500
PFAM: natural resistance-associated macrophage protein; KEGG: sai:Saci_1820 Mn2+ and Fe2+ transporter.
 
  
 0.425
Your Current Organism:
Caldivirga maquilingensis
NCBI taxonomy Id: 397948
Other names: C. maquilingensis IC-167, Caldivirga maquilingensis DSM 13496, Caldivirga maquilingensis IC-167, Caldivirga maquilingensis JCM 10307, Caldivirga maquilingensis str. IC-167, Caldivirga maquilingensis strain IC-167
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