STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
Cmaq_1985PFAM: FAD dependent oxidoreductase; KEGG: hbu:Hbut_0625 sarcosine dehydrogenase beta subunit. (387 aa)    
Predicted Functional Partners:
Cmaq_1984
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: pis:Pisl_1060 hypothetical protein.
 
     0.939
Cmaq_0486
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: tpe:Tpen_1802 FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
  
 
 0.625
Cmaq_0782
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: pai:PAE2834 hypothetical protein.
  
 
 0.625
Cmaq_1123
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; pyridine nucleotide-disulphide oxidoreductase dimerisation region; HI0933 family protein; FAD dependent oxidoreductase; KEGG: pis:Pisl_0611 FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
  
 
 0.625
Cmaq_1604
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; HI0933 family protein; KEGG: sso:SSO2283 NADH oxidase.
  
 
 0.625
Cmaq_1683
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: sto:ST0971 hypothetical sulfide dehydrogenase [flavocytochrome c] flavoprotein subunit.
  
 
 0.625
Cmaq_0190
Alanine--glyoxylate transaminase; PFAM: aminotransferase class V; KEGG: pai:PAE3447 aminotransferase, class-V.
 
 
 0.616
Cmaq_0793
PFAM: aminotransferase class V; KEGG: pis:Pisl_0567 aminotransferase, class V.
 
 
 0.616
fni
Isopentenyl-diphosphate delta-isomerase, type 2; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP).
  
 
 0.510
fni-2
Isopentenyl-diphosphate delta-isomerase, type 2; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP).
  
 
 0.510
Your Current Organism:
Caldivirga maquilingensis
NCBI taxonomy Id: 397948
Other names: C. maquilingensis IC-167, Caldivirga maquilingensis DSM 13496, Caldivirga maquilingensis IC-167, Caldivirga maquilingensis JCM 10307, Caldivirga maquilingensis str. IC-167, Caldivirga maquilingensis strain IC-167
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