STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Cmaq_2000PFAM: Protein of unknown function DUF54; KEGG: tko:TK1335 hypothetical protein; Belongs to the UPF0201 family. (132 aa)    
Predicted Functional Partners:
Cmaq_1999
KEGG: mka:MK0400 dephospho-CoA kinase.
 
    0.950
Cmaq_0953
KEGG: pai:PAE1625 putative serine/threonine protein kinase.
 
     0.753
Cmaq_2001
PFAM: protein of unknown function DUF6 transmembrane; KEGG: pis:Pisl_1137 protein of unknown function DUF6, transmembrane.
       0.737
Cmaq_1117
2'-5' RNA ligase; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family.
       0.698
cca
tRNA cytidylyltransferase; Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate.
       0.697
Cmaq_0021
PFAM: IMP biosynthesis enzyme PurP-like; IMP biosynthesis enzyme PurP; KEGG: pai:PAE0604 hypothetical protein.
  
     0.595
purP
IMP biosynthesis enzyme PurP-like protein; Catalyzes the ATP- and formate-dependent formylation of 5- aminoimidazole-4-carboxamide-1-beta-d-ribofuranosyl 5'-monophosphate (AICAR) to 5-formaminoimidazole-4-carboxamide-1-beta-d-ribofuranosyl 5'-monophosphate (FAICAR) in the absence of folates. Belongs to the phosphohexose mutase family.
  
     0.588
Cmaq_1852
PFAM: Protein of unknown function DUF54; KEGG: hbu:Hbut_0554 hypothetical protein.
  
     0.564
Cmaq_1983
KEGG: ape:APE_0203.1 zinc transporter, ZIP family.
 
     0.550
Cmaq_1998
KEGG: pis:Pisl_0041 hypothetical protein.
       0.550
Your Current Organism:
Caldivirga maquilingensis
NCBI taxonomy Id: 397948
Other names: C. maquilingensis IC-167, Caldivirga maquilingensis DSM 13496, Caldivirga maquilingensis IC-167, Caldivirga maquilingensis JCM 10307, Caldivirga maquilingensis str. IC-167, Caldivirga maquilingensis strain IC-167
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