STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH90963.1Cell division initiation protein. (185 aa)    
Predicted Functional Partners:
sepF
Cell division inhibitor SepF; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA.
  
  
 0.964
SDH91061.1
Hypothetical protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.
  
  
 0.947
SDH91198.1
Cell division protein FtsQ; Essential cell division protein.
     
 0.867
SDH90992.1
S4 domain-containing protein.
  
    0.817
SDH91130.1
Small basic protein.
  
    0.806
SDH91342.1
Stage V sporulation protein D (sporulation-specific penicillin-binding protein).
  
 
 0.774
SDH89879.1
Serine/threonine protein kinase.
 
 
 0.769
SDH91235.1
Cell division protein FtsW; Belongs to the SEDS family.
     
 0.755
SDI30329.1
PASTA domain, binds beta-lactams.
  
 
 0.738
SDH91094.1
Protein of unknown function.
       0.703
Your Current Organism:
Proteiniclasticum ruminis
NCBI taxonomy Id: 398199
Other names: AS 1.5057, Clostridium sp. D3RC-3r, DSM 24773, JCM 14817, P. ruminis, Proteiniclasticum ruminis Zhang et al. 2010, strain D3RC-2
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