STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI06321.1Melibiose permease/lactose/raffinose/galactose permease. (458 aa)    
Predicted Functional Partners:
SDI06356.1
Alpha-galactosidase.
 
  
 0.910
SDJ40879.1
PTS system, D-glucosamine-specific IIA component/PTS system, glucose-specific IIA component.
 
      0.741
SDI62773.1
Beta-galactosidase; Belongs to the glycosyl hydrolase 2 family.
 
  
 0.673
SDI06292.1
Hypothetical protein.
       0.645
galK
Galactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily.
 
  
 0.558
SDI32812.1
Galactokinase/ectonucleotide pyrophosphatase/phosphodiesterase family member 1/3/galacturonokinase.
 
  
 0.512
SDI06393.1
L-ascorbate metabolism protein UlaG, beta-lactamase superfamily.
       0.482
SDJ31810.1
Na+/melibiose symporter.
  
     0.417
Your Current Organism:
Proteiniclasticum ruminis
NCBI taxonomy Id: 398199
Other names: AS 1.5057, Clostridium sp. D3RC-3r, DSM 24773, JCM 14817, P. ruminis, Proteiniclasticum ruminis Zhang et al. 2010, strain D3RC-2
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