STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI36626.1Beta-N-acetylglucosaminidase. (849 aa)    
Predicted Functional Partners:
SDI04409.1
N-acetylmuramoyl-L-alanine amidase.
 
 
 0.960
SDI14611.1
N-acetylmuramoyl-L-alanine amidase.
 
 
 0.855
SDI89395.1
CAAX protease self-immunity.
  
   0.818
guaA
GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP.
    
  0.815
guaB
IMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
  
 
  0.774
SDI02396.1
Uridine kinase.
    
  0.722
SDI62022.1
Uncharacterized conserved protein YabE, contains G5 and tandem DUF348 domains.
  
 
  0.715
SDI60458.1
N-acetylmuramoyl-L-alanine amidase.
  
 
 0.709
SDI30751.1
Lactocepin.
 
 
 0.699
SDI92036.1
LPXTG-motif cell wall anchor domain-containing protein.
    
 0.663
Your Current Organism:
Proteiniclasticum ruminis
NCBI taxonomy Id: 398199
Other names: AS 1.5057, Clostridium sp. D3RC-3r, DSM 24773, JCM 14817, P. ruminis, Proteiniclasticum ruminis Zhang et al. 2010, strain D3RC-2
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