STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI42342.1Ethanolamine utilization protein. (208 aa)    
Predicted Functional Partners:
SDI42381.1
Ethanolamine utilization protein EutN.
       0.773
SDI42423.1
Na+-translocating ferredoxin:NAD+ oxidoreductase RNF, RnfC subunit.
       0.773
SDI42461.1
Carboxysome shell and ethanolamine utilization microcompartment protein CcmL/EutN.
       0.773
SDI42495.1
Hypothetical protein.
       0.714
SDI42530.1
Ethanolamine transporter.
       0.694
SDI42307.1
Ethanolamine utilization cobalamin adenosyltransferase.
       0.675
SDI42564.1
Ethanolamine utilization protein EutQ.
       0.654
SDI42596.1
Alcohol dehydrogenase, class IV.
       0.654
SDI42639.1
Ethanolamine utilization protein EutJ.
       0.576
SDI42198.1
Ethanolamine utilization protein EutM.
       0.504
Your Current Organism:
Proteiniclasticum ruminis
NCBI taxonomy Id: 398199
Other names: AS 1.5057, Clostridium sp. D3RC-3r, DSM 24773, JCM 14817, P. ruminis, Proteiniclasticum ruminis Zhang et al. 2010, strain D3RC-2
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