Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDI03455.1 | SDI52837.1 | SAMN05421804_101519 | SAMN05421804_10330 | Hypothetical protein. | Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily. | 0.888 |
SDI03455.1 | SDI53315.1 | SAMN05421804_101519 | SAMN05421804_10344 | Hypothetical protein. | DNA replication protein DnaC. | 0.750 |
SDI03455.1 | polA | SAMN05421804_101519 | SAMN05421804_10572 | Hypothetical protein. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.517 |
SDI32997.1 | SDI52837.1 | SAMN05421804_10269 | SAMN05421804_10330 | DNA replication protein DnaC. | Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily. | 0.917 |
SDI32997.1 | polA | SAMN05421804_10269 | SAMN05421804_10572 | DNA replication protein DnaC. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.596 |
SDI52564.1 | SDI52837.1 | SAMN05421804_10324 | SAMN05421804_10330 | Single-strand DNA-binding protein. | Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily. | 0.866 |
SDI52564.1 | dnaG | SAMN05421804_10324 | SAMN05421804_101289 | Single-strand DNA-binding protein. | DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. | 0.457 |
SDI52564.1 | polA | SAMN05421804_10324 | SAMN05421804_10572 | Single-strand DNA-binding protein. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.702 |
SDI52564.1 | rplI | SAMN05421804_10324 | SAMN05421804_10328 | Single-strand DNA-binding protein. | Large subunit ribosomal protein L9; Binds to the 23S rRNA. | 0.795 |
SDI52837.1 | SDI03455.1 | SAMN05421804_10330 | SAMN05421804_101519 | Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily. | Hypothetical protein. | 0.888 |
SDI52837.1 | SDI32997.1 | SAMN05421804_10330 | SAMN05421804_10269 | Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily. | DNA replication protein DnaC. | 0.917 |
SDI52837.1 | SDI52564.1 | SAMN05421804_10330 | SAMN05421804_10324 | Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily. | Single-strand DNA-binding protein. | 0.866 |
SDI52837.1 | SDI53315.1 | SAMN05421804_10330 | SAMN05421804_10344 | Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily. | DNA replication protein DnaC. | 0.924 |
SDI52837.1 | SDJ25728.1 | SAMN05421804_10330 | SAMN05421804_1115 | Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily. | DNA replication protein DnaC. | 0.917 |
SDI52837.1 | SDJ36559.1 | SAMN05421804_10330 | SAMN05421804_11540 | Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily. | Elongation factor Tu. | 0.865 |
SDI52837.1 | dnaA | SAMN05421804_10330 | SAMN05421804_1038 | Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily. | Chromosomal replication initiator protein; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family. | 0.945 |
SDI52837.1 | dnaG | SAMN05421804_10330 | SAMN05421804_101289 | Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily. | DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. | 0.992 |
SDI52837.1 | polA | SAMN05421804_10330 | SAMN05421804_10572 | Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.853 |
SDI52837.1 | rplI | SAMN05421804_10330 | SAMN05421804_10328 | Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily. | Large subunit ribosomal protein L9; Binds to the 23S rRNA. | 0.875 |
SDI53315.1 | SDI03455.1 | SAMN05421804_10344 | SAMN05421804_101519 | DNA replication protein DnaC. | Hypothetical protein. | 0.750 |
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