STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI77234.13-oxoacyl-[acyl-carrier protein] reductase. (241 aa)    
Predicted Functional Partners:
SDI99700.1
Condensation domain-containing protein.
  
 0.941
SDI81951.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
    
 0.909
SDI83425.1
Condensation domain-containing protein.
  
 0.860
SDI82825.1
3-oxoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
 0.823
SDI82672.1
acetyl-CoA carboxylase carboxyl transferase subunit alpha/acetyl-CoA carboxylase carboxyl transferase subunit beta.
  
 
 0.814
SDI82891.1
[acyl-carrier-protein] S-malonyltransferase.
 0.813
SDI10806.1
PTS system, sucrose-specific IIC component.
     
 0.785
SDJ02303.1
PTS system, glucose-specific IIC component.
     
 0.785
SDH97832.1
Protein-tyrosine phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
  
 0.774
SDI56958.1
NADPH-dependent glutamate synthase beta chain.
    
 0.767
Your Current Organism:
Proteiniclasticum ruminis
NCBI taxonomy Id: 398199
Other names: AS 1.5057, Clostridium sp. D3RC-3r, DSM 24773, JCM 14817, P. ruminis, Proteiniclasticum ruminis Zhang et al. 2010, strain D3RC-2
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