STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI77351.1acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (392 aa)    
Predicted Functional Partners:
SDI63895.1
butyryl-CoA dehydrogenase.
 
 0.990
SDI08570.1
Acyl-CoA dehydrogenase.
 
 0.989
SDI81951.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
 
 0.982
SDI38146.1
Acetate CoA/acetoacetate CoA-transferase beta subunit.
 
 
 0.956
SDI38176.1
Acetate CoA/acetoacetate CoA-transferase alpha subunit.
 
 
 0.955
SDH89305.1
Phosphate acetyltransferase.
    
 0.953
SDI99467.1
Acetaldehyde dehydrogenase / alcohol dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 0.945
SDI82672.1
acetyl-CoA carboxylase carboxyl transferase subunit alpha/acetyl-CoA carboxylase carboxyl transferase subunit beta.
  
 
 0.944
SDI36836.1
hydroxymethylglutaryl-CoA reductase.
 
  
 0.936
rnfB
Electron transport complex, RnfABCDGE type, B subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.
  
 
 0.932
Your Current Organism:
Proteiniclasticum ruminis
NCBI taxonomy Id: 398199
Other names: AS 1.5057, Clostridium sp. D3RC-3r, DSM 24773, JCM 14817, P. ruminis, Proteiniclasticum ruminis Zhang et al. 2010, strain D3RC-2
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