Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDI00924.1 | SDI72656.1 | SAMN05421804_101453 | SAMN05421804_10432 | Glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase. | 0.903 |
SDI00924.1 | SDI76574.1 | SAMN05421804_101453 | SAMN05421804_104128 | Glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | NADH-quinone oxidoreductase subunit F. | 0.655 |
SDI00924.1 | SDI79765.1 | SAMN05421804_101453 | SAMN05421804_104209 | Glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | Small subunit ribosomal protein S1. | 0.814 |
SDI00924.1 | SDI99467.1 | SAMN05421804_101453 | SAMN05421804_10628 | Glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | Acetaldehyde dehydrogenase / alcohol dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family. | 0.597 |
SDI00924.1 | SDJ06885.1 | SAMN05421804_101453 | SAMN05421804_10731 | Glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | Phytoene synthase. | 0.819 |
SDI71965.1 | SDI72656.1 | SAMN05421804_10411 | SAMN05421804_10432 | Geranylgeranyl diphosphate synthase, type II; Belongs to the FPP/GGPP synthase family. | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase. | 0.968 |
SDI71965.1 | SDI76574.1 | SAMN05421804_10411 | SAMN05421804_104128 | Geranylgeranyl diphosphate synthase, type II; Belongs to the FPP/GGPP synthase family. | NADH-quinone oxidoreductase subunit F. | 0.480 |
SDI71965.1 | SDI79765.1 | SAMN05421804_10411 | SAMN05421804_104209 | Geranylgeranyl diphosphate synthase, type II; Belongs to the FPP/GGPP synthase family. | Small subunit ribosomal protein S1. | 0.939 |
SDI71965.1 | SDJ06885.1 | SAMN05421804_10411 | SAMN05421804_10731 | Geranylgeranyl diphosphate synthase, type II; Belongs to the FPP/GGPP synthase family. | Phytoene synthase. | 0.876 |
SDI71965.1 | SDJ06922.1 | SAMN05421804_10411 | SAMN05421804_10732 | Geranylgeranyl diphosphate synthase, type II; Belongs to the FPP/GGPP synthase family. | Phytoene desaturase. | 0.712 |
SDI72656.1 | SDI00924.1 | SAMN05421804_10432 | SAMN05421804_101453 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase. | Glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | 0.903 |
SDI72656.1 | SDI71965.1 | SAMN05421804_10432 | SAMN05421804_10411 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase. | Geranylgeranyl diphosphate synthase, type II; Belongs to the FPP/GGPP synthase family. | 0.968 |
SDI72656.1 | SDI79765.1 | SAMN05421804_10432 | SAMN05421804_104209 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase. | Small subunit ribosomal protein S1. | 0.970 |
SDI72656.1 | SDI82672.1 | SAMN05421804_10432 | SAMN05421804_104278 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase. | acetyl-CoA carboxylase carboxyl transferase subunit alpha/acetyl-CoA carboxylase carboxyl transferase subunit beta. | 0.484 |
SDI72656.1 | SDI87968.1 | SAMN05421804_10432 | SAMN05421804_1052 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase. | Deoxyadenosine/deoxycytidine kinase. | 0.879 |
SDI72656.1 | SDI99467.1 | SAMN05421804_10432 | SAMN05421804_10628 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase. | Acetaldehyde dehydrogenase / alcohol dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family. | 0.821 |
SDI72656.1 | SDJ06885.1 | SAMN05421804_10432 | SAMN05421804_10731 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase. | Phytoene synthase. | 0.775 |
SDI76574.1 | SDI00924.1 | SAMN05421804_104128 | SAMN05421804_101453 | NADH-quinone oxidoreductase subunit F. | Glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | 0.655 |
SDI76574.1 | SDI71965.1 | SAMN05421804_104128 | SAMN05421804_10411 | NADH-quinone oxidoreductase subunit F. | Geranylgeranyl diphosphate synthase, type II; Belongs to the FPP/GGPP synthase family. | 0.480 |
SDI76574.1 | SDI82672.1 | SAMN05421804_104128 | SAMN05421804_104278 | NADH-quinone oxidoreductase subunit F. | acetyl-CoA carboxylase carboxyl transferase subunit alpha/acetyl-CoA carboxylase carboxyl transferase subunit beta. | 0.806 |
page 1 of 3