STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ08551.1Putative ABC transport system ATP-binding protein. (263 aa)    
Predicted Functional Partners:
SDJ08585.1
Putative ABC transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
    0.996
SDJ08620.1
Putative ABC transport system substrate-binding protein.
 
    0.971
SDJ28278.1
Oligopeptide transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
     
0.895
SDJ31891.1
ATP-binding cassette, subfamily B.
 
     
0.829
pstB
Phosphate transport system ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
 
     
0.797
SDJ36479.1
ABC-type multidrug transport system, ATPase and permease component.
 
     
0.578
SDJ08661.1
HutP protein.
       0.576
SDI61123.1
ATP-binding cassette, subfamily B.
 
     
0.555
SDJ36517.1
ATP-binding cassette, subfamily C.
 
     
0.500
Your Current Organism:
Proteiniclasticum ruminis
NCBI taxonomy Id: 398199
Other names: AS 1.5057, Clostridium sp. D3RC-3r, DSM 24773, JCM 14817, P. ruminis, Proteiniclasticum ruminis Zhang et al. 2010, strain D3RC-2
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