STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ17890.1triphosphoribosyl-dephospho-CoA synthase. (234 aa)    
Predicted Functional Partners:
SDJ22048.1
holo-ACP synthase/holo-ACP synthase / triphosphoribosyl-dephospho-CoA synthase.
 
 0.989
SDJ21881.1
[citrate (pro-3S)-lyase] ligase.
 
  
 0.924
SDI38341.1
Citrate lyase subunit gamma (acyl carrier protein); Covalent carrier of the coenzyme of citrate lyase.
 
  
 0.921
SDJ21922.1
Citrate lyase subunit gamma (acyl carrier protein).
 
  
 0.921
SDJ21843.1
Citrate lyase subunit gamma (acyl carrier protein).
 
  
 0.921
SDJ13656.1
holo-ACP synthase.
 
 0.918
SDI38297.1
holo-ACP synthase/holo-ACP synthase / triphosphoribosyl-dephospho-CoA synthase.
 
 0.917
SDJ17857.1
FCD domain-containing protein.
     0.902
SDJ21964.1
Citrate lyase subunit beta / citryl-CoA lyase; Belongs to the HpcH/HpaI aldolase family.
 
  
 0.890
SDJ22004.1
Citrate lyase subunit alpha / citrate CoA-transferase.
 
  
 0.872
Your Current Organism:
Proteiniclasticum ruminis
NCBI taxonomy Id: 398199
Other names: AS 1.5057, Clostridium sp. D3RC-3r, DSM 24773, JCM 14817, P. ruminis, Proteiniclasticum ruminis Zhang et al. 2010, strain D3RC-2
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.