STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ23655.16-phospho-beta-glucosidase; Belongs to the glycosyl hydrolase 1 family. (475 aa)    
Predicted Functional Partners:
SDJ23693.1
PTS system, cellobiose-specific IIA component.
 
 
 0.995
SDJ23526.1
PTS system, cellobiose-specific IIC component; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane.
 
 0.993
SDJ23455.1
PTS system, cellobiose-specific IIB component.
 
 
 0.975
SDI10806.1
PTS system, sucrose-specific IIC component.
 
 
 0.969
SDJ02303.1
PTS system, glucose-specific IIC component.
  
 
 0.969
SDI91791.1
PTS system, cellobiose-specific IIB component.
 
 
 0.956
SDH86858.1
Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family.
    
 0.916
SDI10763.1
Beta-fructofuranosidase; Enables the bacterium to metabolize sucrose as a sole carbon source; Belongs to the glycosyl hydrolase 32 family.
  
 
 0.903
SDJ06603.1
Mannose-6-phosphate isomerase.
 
 
 0.902
pgi
Glucose-6-phosphate isomerase; Belongs to the GPI family.
     
 0.889
Your Current Organism:
Proteiniclasticum ruminis
NCBI taxonomy Id: 398199
Other names: AS 1.5057, Clostridium sp. D3RC-3r, DSM 24773, JCM 14817, P. ruminis, Proteiniclasticum ruminis Zhang et al. 2010, strain D3RC-2
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