Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDH84406.1 | SDH99990.1 | SAMN05421804_1014 | SAMN05421804_101427 | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | PAS domain S-box-containing protein. | 0.999 |
SDH84406.1 | SDI00023.1 | SAMN05421804_1014 | SAMN05421804_101428 | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | Signal transduction histidine kinase. | 0.999 |
SDH84406.1 | SDI44420.1 | SAMN05421804_1014 | SAMN05421804_102361 | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein/HDIG domain-containing protein. | 0.995 |
SDH84406.1 | SDJ28935.1 | SAMN05421804_1014 | SAMN05421804_11232 | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | Hypothetical protein. | 0.759 |
SDH84406.1 | guaA | SAMN05421804_1014 | SAMN05421804_10789 | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP. | 0.775 |
SDH84406.1 | guaB | SAMN05421804_1014 | SAMN05421804_10788 | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | IMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.766 |
SDH99990.1 | SDH84406.1 | SAMN05421804_101427 | SAMN05421804_1014 | PAS domain S-box-containing protein. | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | 0.999 |
SDH99990.1 | SDI00023.1 | SAMN05421804_101427 | SAMN05421804_101428 | PAS domain S-box-containing protein. | Signal transduction histidine kinase. | 0.999 |
SDH99990.1 | SDI44420.1 | SAMN05421804_101427 | SAMN05421804_102361 | PAS domain S-box-containing protein. | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein/HDIG domain-containing protein. | 0.999 |
SDH99990.1 | SDJ28935.1 | SAMN05421804_101427 | SAMN05421804_11232 | PAS domain S-box-containing protein. | Hypothetical protein. | 0.552 |
SDH99990.1 | guaA | SAMN05421804_101427 | SAMN05421804_10789 | PAS domain S-box-containing protein. | GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP. | 0.792 |
SDH99990.1 | guaB | SAMN05421804_101427 | SAMN05421804_10788 | PAS domain S-box-containing protein. | IMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.804 |
SDI00023.1 | SDH84406.1 | SAMN05421804_101428 | SAMN05421804_1014 | Signal transduction histidine kinase. | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | 0.999 |
SDI00023.1 | SDH99990.1 | SAMN05421804_101428 | SAMN05421804_101427 | Signal transduction histidine kinase. | PAS domain S-box-containing protein. | 0.999 |
SDI00023.1 | SDI44420.1 | SAMN05421804_101428 | SAMN05421804_102361 | Signal transduction histidine kinase. | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein/HDIG domain-containing protein. | 0.999 |
SDI00023.1 | SDJ28935.1 | SAMN05421804_101428 | SAMN05421804_11232 | Signal transduction histidine kinase. | Hypothetical protein. | 0.874 |
SDI00023.1 | guaA | SAMN05421804_101428 | SAMN05421804_10789 | Signal transduction histidine kinase. | GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP. | 0.804 |
SDI00023.1 | guaB | SAMN05421804_101428 | SAMN05421804_10788 | Signal transduction histidine kinase. | IMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.898 |
SDI44420.1 | SDH84406.1 | SAMN05421804_102361 | SAMN05421804_1014 | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein/HDIG domain-containing protein. | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | 0.995 |
SDI44420.1 | SDH99990.1 | SAMN05421804_102361 | SAMN05421804_101427 | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein/HDIG domain-containing protein. | PAS domain S-box-containing protein. | 0.999 |
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