Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MANES_S011300Uncharacterized protein. (292 aa)    
Predicted Functional Partners:
A0A251J7D6
WD_REPEATS_REGION domain-containing protein.
      
 0.499
A0A2C9U7Y3
WD_REPEATS_REGION domain-containing protein.
      
 0.499
A0A2C9UM32
Uncharacterized protein.
  
     0.470
A0A2C9UEU3
Uncharacterized protein.
      
 0.458
A0A2C9W717
Uncharacterized protein.
      
 0.458
A0A2C9U055
Uncharacterized protein.
  
     0.449
A0A2C9UB94
Uncharacterized protein.
  
     0.444
A0A2C9VW10
Uncharacterized protein.
  
     0.440
A0A2C9U6Q9
Uncharacterized protein.
  
     0.434
A0A2C9UG38
Uncharacterized protein.
  
     0.428
Your Current Organism:
Manihot esculenta
NCBI taxonomy Id: 3983
Other names: M. esculenta, Manihot esculenta Crantz, Manihot utilissima, cassava, manioc, tapioca, yuca
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