STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MANES_S001200Protein kinase domain-containing protein. (727 aa)    
Predicted Functional Partners:
A0A2C9VLP0
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
  
 
0.642
A0A251J8W0
Uncharacterized protein; Belongs to the cyclin family.
    
 0.621
A0A251KRJ6
Uncharacterized protein; Belongs to the cyclin family.
    
 0.621
A0A251KWX2
Uncharacterized protein; Belongs to the cyclin family.
    
 0.621
A0A2C9VKY1
Uncharacterized protein.
    
 0.621
A0A2C9W8M2
Uncharacterized protein; Belongs to the cyclin family.
    
 0.621
A0A2C9WIV2
Transcription elongation factor SPT4 homolog; May regulate transcription elongation by RNA polymerase II. May enhance transcriptional pausing at sites proximal to the promoter, which may in turn facilitate the assembly of an elongation competent RNA polymerase II complex; Belongs to the SPT4 family.
    
 0.600
A0A2C9VCR0
CYCLIN domain-containing protein; Belongs to the cyclin family.
    
 0.591
A0A2C9VPU0
CPSF_A domain-containing protein.
    
 
 0.585
A0A2C9U1L5
Transcription elongation factor SPT5.
    
 0.535
Your Current Organism:
Manihot esculenta
NCBI taxonomy Id: 3983
Other names: M. esculenta, Manihot esculenta Crantz, Manihot utilissima, cassava, manioc, tapioca, yuca
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.