STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A251KAD2Uncharacterized protein. (313 aa)    
Predicted Functional Partners:
A0A2C9URM6
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
   
 0.972
A0A2C9VZR3
Uncharacterized protein.
   
 0.972
A0A2C9WA48
Uncharacterized protein.
   
 0.969
A0A2C9V1S9
Uncharacterized protein.
  
  
 
0.901
A0A2C9VX64
Uncharacterized protein.
  
  
 
0.901
A0A2C9V881
Uncharacterized protein.
     
 
0.900
A0A2C9UMG1
RRM domain-containing protein.
   
 0.835
A0A2C9U4Y1
DUF3700 domain-containing protein.
   
 0.729
A0A2C9U5G6
X8 domain-containing protein.
   
 0.729
A0A2C9U945
DUF3700 domain-containing protein.
   
 0.729
Your Current Organism:
Manihot esculenta
NCBI taxonomy Id: 3983
Other names: M. esculenta, Manihot esculenta Crantz, Manihot utilissima, cassava, manioc, tapioca, yuca
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.