STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A251KE80HTH myb-type domain-containing protein. (454 aa)    
Predicted Functional Partners:
A0A2C9U0T5
SPX domain-containing protein.
    
 0.692
A0A2C9UMI4
SPX domain-containing protein.
    
 0.692
A0A2C9W300
SPX domain-containing protein.
    
 0.692
A0A2C9WL46
Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
 0.574
A0A2C9U8W4
Uncharacterized protein.
    
  0.471
A0A2C9VVG3
Serine/threonine-protein phosphatase.
    
  0.471
A0A2C9WMR1
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family. BSU subfamily.
    
  0.471
A0A2C9UI73
Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family.
  
 
   0.415
A0A2C9WAW4
SPX domain-containing protein.
    
 0.408
Your Current Organism:
Manihot esculenta
NCBI taxonomy Id: 3983
Other names: M. esculenta, Manihot esculenta Crantz, Manihot utilissima, cassava, manioc, tapioca, yuca
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