Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A251KPI2PMR5N domain-containing protein. (556 aa)    
Predicted Functional Partners:
A0A2C9VB75
Uncharacterized protein.
    
 0.689
A0A2C9VI16
Uncharacterized protein.
    
 0.689
A0A2C9VUJ5
Uncharacterized protein.
    
 0.689
A0A2C9VWP1
Uncharacterized protein.
    
 0.689
A0A2C9ULL6
Uncharacterized protein.
    
 0.660
A0A2C9UT13
Uncharacterized protein.
    
 0.660
A0A2C9UVD6
Uncharacterized protein.
    
 0.660
A0A2C9VPH0
Uncharacterized protein.
    
 0.660
A0A2C9VLL0
Uncharacterized protein.
    
 
 0.649
A0A251J0T2
SWIM-type domain-containing protein.
   
 
 0.645
Your Current Organism:
Manihot esculenta
NCBI taxonomy Id: 3983
Other names: M. esculenta, Manihot esculenta Crantz, Manihot utilissima, cassava, manioc, tapioca, yuca
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