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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A251KSS3ELM2 domain-containing protein. (498 aa)    
Predicted Functional Partners:
A0A2C9W3N4
Auxin-responsive protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.
  
     0.489
A0A2C9UZ78
Auxin-responsive protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.
  
     0.479
A0A0M4FKW2
NAC transcription factors 1.
  
     0.474
A0A2C9UFY2
Uncharacterized protein.
  
     0.460
A0A2C9VB34
Uncharacterized protein.
  
     0.452
A0A2C9U605
Uncharacterized protein.
  
     0.451
A0A251JDY7
Uncharacterized protein.
  
    0.446
A0A2C9V3C0
Uncharacterized protein.
  
     0.446
A0A0M5J8S1
NAC transcription factors 85.
  
     0.445
A0A2C9UAZ8
Jas domain-containing protein.
  
     0.439
Your Current Organism:
Manihot esculenta
NCBI taxonomy Id: 3983
Other names: M. esculenta, Manihot esculenta Crantz, Manihot utilissima, cassava, manioc, tapioca, yuca
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.