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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A251KSS4AAA_16 domain-containing protein. (537 aa)    
Predicted Functional Partners:
A0A2C9VGP0
Uncharacterized protein.
   
 0.999
A0A2C9UHQ4
Origin recognition complex subunit 1; Component of the origin recognition complex (ORC) that binds origins of replication. DNA-binding is ATP-dependent, however specific DNA sequences that define origins of replication have not been identified so far. ORC is required to assemble the pre-replication complex necessary to initiate DNA replication.
   
 0.998
A0A2C9VGU7
ORC_WH_C domain-containing protein.
   
 0.998
A0A2C9WM46
Uncharacterized protein.
   
 0.998
A0A2C9V445
Origin of replication complex subunit 4; Component of the origin recognition complex (ORC) that binds origins of replication; Belongs to the ORC4 family.
   
 0.997
A0A2C9VMV9
DNA helicase; Belongs to the MCM family.
   
 0.997
MANES_S101400
DNA helicase; Belongs to the MCM family.
   
 0.996
A0A2C9WL64
Cell division control protein; Belongs to the CDC6/cdc18 family.
   
 0.996
A0A2C9VEE3
Uncharacterized protein.
   
 0.994
A0A2C9U6P1
DNA helicase; Belongs to the MCM family.
   
 0.992
Your Current Organism:
Manihot esculenta
NCBI taxonomy Id: 3983
Other names: M. esculenta, Manihot esculenta Crantz, Manihot utilissima, cassava, manioc, tapioca, yuca
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.