A0A251L307 protein (Manihot esculenta) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A251L307

Protein kinase domain-containing protein. (573 aa)

Predicted Functional Partners:

A0A2C9WL64

0.893

A0A2C9VGP0

0.867

A0A2C9UA62

0.864

A0A251KZF5

0.861

A0A2C9V2R2

0.861

A0A2C9VLP0

0.835

A0A2C9VW20

0.834

A0A2C9WQA5

0.834

A0A2C9UEC7

0.799

A0A251KJL1

0.795

Your Current Organism:

Manihot esculenta

NCBI taxonomy Id: 3983
Other names: M. esculenta, Manihot esculenta Crantz, Manihot utilissima, cassava, manioc, tapioca, yuca

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A251KJL1	A0A251L307	APC1_C domain-containing protein.	Protein kinase domain-containing protein.	0.795
A0A251KJL1	A0A2C9UEC7	APC1_C domain-containing protein.	TPR_REGION domain-containing protein.	0.998
A0A251KJL1	A0A2C9VW20	APC1_C domain-containing protein.	Protein kinase domain-containing protein.	0.560
A0A251KJL1	A0A2C9WL64	APC1_C domain-containing protein.	Cell division control protein; Belongs to the CDC6/cdc18 family.	0.830
A0A251KJL1	A0A2C9WQA5	APC1_C domain-containing protein.	Protein kinase domain-containing protein.	0.560
A0A251KZF5	A0A251L307	Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function.	Protein kinase domain-containing protein.	0.861
A0A251KZF5	A0A2C9UA62	Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function.	Rhodanese domain-containing protein.	0.625
A0A251KZF5	A0A2C9UEC7	Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function.	TPR_REGION domain-containing protein.	0.412
A0A251KZF5	A0A2C9VLP0	Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.520
A0A251KZF5	A0A2C9VW20	Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function.	Protein kinase domain-containing protein.	0.806
A0A251KZF5	A0A2C9WL64	Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function.	Cell division control protein; Belongs to the CDC6/cdc18 family.	0.550
A0A251KZF5	A0A2C9WQA5	Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function.	Protein kinase domain-containing protein.	0.806
A0A251L307	A0A251KJL1	Protein kinase domain-containing protein.	APC1_C domain-containing protein.	0.795
A0A251L307	A0A251KZF5	Protein kinase domain-containing protein.	Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function.	0.861
A0A251L307	A0A2C9UA62	Protein kinase domain-containing protein.	Rhodanese domain-containing protein.	0.864
A0A251L307	A0A2C9UEC7	Protein kinase domain-containing protein.	TPR_REGION domain-containing protein.	0.799
A0A251L307	A0A2C9V2R2	Protein kinase domain-containing protein.	Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function.	0.861
A0A251L307	A0A2C9VGP0	Protein kinase domain-containing protein.	Uncharacterized protein.	0.867
A0A251L307	A0A2C9VLP0	Protein kinase domain-containing protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.835
A0A251L307	A0A2C9VW20	Protein kinase domain-containing protein.	Protein kinase domain-containing protein.	0.834