A0A251LL44 protein (Manihot esculenta) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

A0A251LL44

DUF1308 domain-containing protein. (431 aa)

Predicted Functional Partners:

A0A251IWP8

0.577

A0A2C9UHS9

0.494

A0A2C9VRW0

0.494

A0A2C9WC18

0.459

A0A2C9W857

0.447

A0A2C9WP69

0.433

A0A2C9V058

0.421

A0A2C9VU20

0.421

A0A2C9WL53

0.420

A0A251LLJ9

0.406

Your Current Organism:

Manihot esculenta

NCBI taxonomy Id: 3983
Other names: M. esculenta, Manihot esculenta Crantz, Manihot utilissima, cassava, manioc, tapioca, yuca

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A251IWP8	A0A251LL44	Uncharacterized protein.	DUF1308 domain-containing protein.	0.577
A0A251IWP8	A0A2C9UHS9	Uncharacterized protein.	Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family.	0.625
A0A251IWP8	A0A2C9VRW0	Uncharacterized protein.	Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family.	0.625
A0A251LL44	A0A251IWP8	DUF1308 domain-containing protein.	Uncharacterized protein.	0.577
A0A251LL44	A0A251LLJ9	DUF1308 domain-containing protein.	CDT1 domain-containing protein.	0.406
A0A251LL44	A0A2C9UHS9	DUF1308 domain-containing protein.	Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family.	0.494
A0A251LL44	A0A2C9V058	DUF1308 domain-containing protein.	Uncharacterized protein.	0.421
A0A251LL44	A0A2C9VRW0	DUF1308 domain-containing protein.	Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family.	0.494
A0A251LL44	A0A2C9VU20	DUF1308 domain-containing protein.	Uncharacterized protein.	0.421
A0A251LL44	A0A2C9W857	DUF1308 domain-containing protein.	Uncharacterized protein.	0.447
A0A251LL44	A0A2C9WC18	DUF1308 domain-containing protein.	Uncharacterized protein.	0.459
A0A251LL44	A0A2C9WL53	DUF1308 domain-containing protein.	Uncharacterized protein.	0.420
A0A251LL44	A0A2C9WP69	DUF1308 domain-containing protein.	Uncharacterized protein.	0.433
A0A251LLJ9	A0A251LL44	CDT1 domain-containing protein.	DUF1308 domain-containing protein.	0.406
A0A2C9UHS9	A0A251IWP8	Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family.	Uncharacterized protein.	0.625
A0A2C9UHS9	A0A251LL44	Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family.	DUF1308 domain-containing protein.	0.494
A0A2C9UHS9	A0A2C9VRW0	Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family.	Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family.	0.900
A0A2C9V058	A0A251LL44	Uncharacterized protein.	DUF1308 domain-containing protein.	0.421
A0A2C9V058	A0A2C9VU20	Uncharacterized protein.	Uncharacterized protein.	0.475
A0A2C9V058	A0A2C9WP69	Uncharacterized protein.	Uncharacterized protein.	0.480