Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A251LP22Uncharacterized protein. (105 aa)    
Predicted Functional Partners:
A0A2C9VUR9
Uncharacterized protein.
  
     0.500
A0A2C9UVS1
WPP domain-containing protein.
  
     0.491
A0A251J4Z5
WPP domain-containing protein.
  
     0.482
A0A2C9V1U3
F-box domain-containing protein.
  
     0.435
A0A2C9UGR0
Uncharacterized protein.
  
     0.432
A0A2C9VEK5
LEA_2 domain-containing protein.
  
     0.424
A0A2C9VB53
Uncharacterized protein.
  
     0.419
A0A251LUJ1
AAA domain-containing protein.
  
     0.418
A0A2C9UGU8
CASP-like protein; Belongs to the Casparian strip membrane proteins (CASP) family.
  
     0.415
A0A2C9VYE8
Uncharacterized protein.
  
     0.407
Your Current Organism:
Manihot esculenta
NCBI taxonomy Id: 3983
Other names: M. esculenta, Manihot esculenta Crantz, Manihot utilissima, cassava, manioc, tapioca, yuca
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