STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A251LPV2t-SNARE coiled-coil homology domain-containing protein. (233 aa)    
Predicted Functional Partners:
A0A2C9VV44
V-SNARE domain-containing protein.
   
 0.961
A0A2C9WH96
V-SNARE domain-containing protein.
   
 0.961
A0A251LF00
V-SNARE domain-containing protein.
   
 0.960
A0A251LQ32
V-SNARE domain-containing protein.
   
 0.960
A0A2C9UL12
V-SNARE domain-containing protein.
   
 0.960
A0A2C9V3B7
TPR_REGION domain-containing protein.
    
 0.946
A0A2C9VBN5
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
    
 0.946
A0A2C9VNB1
Uncharacterized protein.
    
 0.946
A0A2C9WNL4
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
    
 0.946
A0A2C9U3P3
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
    
 0.943
Your Current Organism:
Manihot esculenta
NCBI taxonomy Id: 3983
Other names: M. esculenta, Manihot esculenta Crantz, Manihot utilissima, cassava, manioc, tapioca, yuca
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