Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A251LS47DUF4378 domain-containing protein. (891 aa)    
Predicted Functional Partners:
A0A2C9WD55
VARLMGL domain-containing protein.
      
 0.555
A0A2C9VWD0
Uncharacterized protein.
  
    0.554
A0A2C9WLZ4
Uncharacterized protein.
  
    0.547
A0A2C9U3Y5
Uncharacterized protein.
  
     0.527
A0A2C9WGU1
Uncharacterized protein.
  
     0.524
A0A251L3R4
Uncharacterized protein.
  
  
 0.520
A0A2C9UZP3
Uncharacterized protein.
  
     0.517
A0A2C9W0Y1
Uncharacterized protein.
  
     0.517
A0A2C9U279
Uncharacterized protein.
  
     0.516
A0A2C9WFW7
UBA domain-containing protein.
  
     0.511
Your Current Organism:
Manihot esculenta
NCBI taxonomy Id: 3983
Other names: M. esculenta, Manihot esculenta Crantz, Manihot utilissima, cassava, manioc, tapioca, yuca
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