Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A2C9TZ95Peptidase_M14 domain-containing protein. (278 aa)    
Predicted Functional Partners:
A0A2C9WHG4
Uncharacterized protein.
   
 
 0.727
A0A251K2X0
Uncharacterized protein.
    
  0.598
A0A2C9UEP4
Uncharacterized protein.
    
   0.555
A0A251LKS8
SERPIN domain-containing protein; Belongs to the serpin family.
     
 0.552
A0A2C9U2D3
SERPIN domain-containing protein; Belongs to the serpin family.
     
 0.552
A0A2C9U437
SERPIN domain-containing protein; Belongs to the serpin family.
     
 0.552
A0A2C9VX02
SERPIN domain-containing protein; Belongs to the serpin family.
     
 0.552
A0A2C9U7W7
TPX2 domain-containing protein.
     
 0.515
A0A2C9UGA9
TPX2 domain-containing protein.
     
 0.515
A0A2C9UNF1
Photosystem II reaction center Psb28 protein; Belongs to the Psb28 family.
     
 0.515
Your Current Organism:
Manihot esculenta
NCBI taxonomy Id: 3983
Other names: M. esculenta, Manihot esculenta Crantz, Manihot utilissima, cassava, manioc, tapioca, yuca
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