STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2C9TZP4Uncharacterized protein. (147 aa)    
Predicted Functional Partners:
A0A2C9UQ08
Uncharacterized protein.
   
  
 0.595
A0A2C9VEI8
Uncharacterized protein.
      
 0.515
A0A2C9U7P8
Uncharacterized protein.
  
     0.456
A0A2C9UEU3
Uncharacterized protein.
  
     0.443
A0A2C9USE4
Uncharacterized protein.
      
 0.428
A0A2C9V0J7
Uncharacterized protein.
      
 0.426
A0A2C9VRI4
Uncharacterized protein.
      
 0.426
A0A2C9WED9
Uncharacterized protein.
  
     0.409
Your Current Organism:
Manihot esculenta
NCBI taxonomy Id: 3983
Other names: M. esculenta, Manihot esculenta Crantz, Manihot utilissima, cassava, manioc, tapioca, yuca
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.