STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2C9UFS9GRAS domain-containing protein; Belongs to the GRAS family. (634 aa)    
Predicted Functional Partners:
A0A251KDK4
Abhydrolase_3 domain-containing protein.
    
 0.985
A0A2C9VBI0
Abhydrolase_3 domain-containing protein.
    
 0.985
A0A2C9VU39
Abhydrolase_3 domain-containing protein.
    
 0.985
A0A2C9WP30
Abhydrolase_3 domain-containing protein.
    
 0.985
A0A2C9VXD4
F-box domain-containing protein.
    
 0.954
A0A2C9VE55
BHLH domain-containing protein.
    
 0.920
A0A2C9VF99
BHLH domain-containing protein.
    
 0.920
A0A2C9VSA0
BHLH domain-containing protein.
    
 0.920
A0A2C9VBN1
Uncharacterized protein.
    
 
 0.727
A0A2C9V976
Non-structural maintenance of chromosomes element 4; Component of the SMC5-SMC6 complex, that promotes sister chromatid alignment after DNA damage and facilitates double-stranded DNA breaks (DSBs) repair via homologous recombination between sister chromatids.
      
 0.720
Your Current Organism:
Manihot esculenta
NCBI taxonomy Id: 3983
Other names: M. esculenta, Manihot esculenta Crantz, Manihot utilissima, cassava, manioc, tapioca, yuca
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