A0A2C9UG52 protein (Manihot esculenta) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A2C9UG52

Glyco_transf_20 domain-containing protein. (913 aa)

Predicted Functional Partners:

A0A251JHJ9

0.826

A0A2C9U1A0

0.825

A0A2C9UVZ6

0.825

A0A2C9VQP4

0.825

A0A2C9UIE6

0.824

A0A2C9WIS5

0.822

A0A2C9VR71

0.817

A0A2C9UI58

0.814

A0A2C9W9N5

0.814

A0A2C9WI39

0.814

Your Current Organism:

Manihot esculenta

NCBI taxonomy Id: 3983
Other names: M. esculenta, Manihot esculenta Crantz, Manihot utilissima, cassava, manioc, tapioca, yuca

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A251JHJ9	A0A2C9UG52	Trehalose 6-phosphate phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.	Glyco_transf_20 domain-containing protein.	0.826
A0A251JHJ9	A0A2C9W9N5	Trehalose 6-phosphate phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.	Trehalase.	0.940
A0A251JHJ9	A0A2C9WI39	Trehalose 6-phosphate phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.	Trehalase.	0.940
A0A2C9U1A0	A0A2C9UG52	Trehalose 6-phosphate phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.	Glyco_transf_20 domain-containing protein.	0.825
A0A2C9U1A0	A0A2C9W9N5	Trehalose 6-phosphate phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.	Trehalase.	0.931
A0A2C9U1A0	A0A2C9WI39	Trehalose 6-phosphate phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.	Trehalase.	0.931
A0A2C9UG52	A0A251JHJ9	Glyco_transf_20 domain-containing protein.	Trehalose 6-phosphate phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.	0.826
A0A2C9UG52	A0A2C9U1A0	Glyco_transf_20 domain-containing protein.	Trehalose 6-phosphate phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.	0.825
A0A2C9UG52	A0A2C9UI58	Glyco_transf_20 domain-containing protein.	Trehalose 6-phosphate phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.	0.814
A0A2C9UG52	A0A2C9UIE6	Glyco_transf_20 domain-containing protein.	Trehalose 6-phosphate phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.	0.824
A0A2C9UG52	A0A2C9UVZ6	Glyco_transf_20 domain-containing protein.	Trehalose 6-phosphate phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.	0.825
A0A2C9UG52	A0A2C9VQP4	Glyco_transf_20 domain-containing protein.	Trehalose 6-phosphate phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.	0.825
A0A2C9UG52	A0A2C9VR71	Glyco_transf_20 domain-containing protein.	Trehalose 6-phosphate phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.	0.817
A0A2C9UG52	A0A2C9W9N5	Glyco_transf_20 domain-containing protein.	Trehalase.	0.814
A0A2C9UG52	A0A2C9WI39	Glyco_transf_20 domain-containing protein.	Trehalase.	0.814
A0A2C9UG52	A0A2C9WIS5	Glyco_transf_20 domain-containing protein.	Trehalose 6-phosphate phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.	0.822
A0A2C9UI58	A0A2C9UG52	Trehalose 6-phosphate phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.	Glyco_transf_20 domain-containing protein.	0.814
A0A2C9UI58	A0A2C9W9N5	Trehalose 6-phosphate phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.	Trehalase.	0.953
A0A2C9UI58	A0A2C9WI39	Trehalose 6-phosphate phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.	Trehalase.	0.953
A0A2C9UIE6	A0A2C9UG52	Trehalose 6-phosphate phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.	Glyco_transf_20 domain-containing protein.	0.824