Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A2C9UMW0Uncharacterized protein. (172 aa)    
Predicted Functional Partners:
A0A2C9U4A2
Uncharacterized protein.
   
 
 0.833
A0A2C9VSU3
Uncharacterized protein.
   
 
 0.809
A0A2C9VS39
Pept_C1 domain-containing protein; Belongs to the peptidase C1 family.
      
 0.789
A0A2C9WNM5
Pept_C1 domain-containing protein; Belongs to the peptidase C1 family.
      
 0.789
A0A2C9VHZ7
S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.
   
   0.785
A0A2C9UGG8
Uncharacterized protein.
   
 
 0.771
A0A2C9UXG5
Uncharacterized protein.
   
 
 0.749
A0A251JCP9
Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.
  
 
 0.747
A0A2C9WPF5
Uncharacterized protein.
   
 
 0.743
A0A2C9VMA1
L51_S25_CI-B8 domain-containing protein.
   
 
 0.737
Your Current Organism:
Manihot esculenta
NCBI taxonomy Id: 3983
Other names: M. esculenta, Manihot esculenta Crantz, Manihot utilissima, cassava, manioc, tapioca, yuca
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