STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2C9US99Uncharacterized protein. (484 aa)    
Predicted Functional Partners:
A0A2C9U585
AP2/ERF domain-containing protein.
  
   
 0.502
A0A2C9U163
AP2/ERF domain-containing protein.
  
 
 0.489
A0A2C9USX4
AP2/ERF domain-containing protein.
  
   
 0.482
A0A2C9UR34
F-box domain-containing protein.
      
 0.444
A0A2C9W4I2
Dof-type domain-containing protein.
  
 
  0.443
A0A2C9W9M3
AP2/ERF domain-containing protein.
  
     0.438
A0A2C9UZC6
Dof-type domain-containing protein.
  
 
  0.435
A0A2C9U0G9
Dof-type domain-containing protein.
  
 
  0.432
A0A2C9VWG1
Uncharacterized protein.
      
 0.431
A0A2C9UPK5
AP2/ERF domain-containing protein.
  
   
 0.428
Your Current Organism:
Manihot esculenta
NCBI taxonomy Id: 3983
Other names: M. esculenta, Manihot esculenta Crantz, Manihot utilissima, cassava, manioc, tapioca, yuca
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.