STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2C9UT15LysM domain-containing protein. (218 aa)    
Predicted Functional Partners:
A0A2C9U4G1
Uncharacterized protein.
  
     0.512
A0A251LCG5
RING-type E3 ubiquitin transferase.
  
 
   0.506
A0A2C9VXH5
Exocyst subunit Exo70 family protein; Component of the exocyst complex.
  
 
   0.498
A0A2C9UK31
GRAS domain-containing protein; Belongs to the GRAS family.
  
     0.492
A0A2C9VRE3
Uncharacterized protein.
  
 
   0.488
A0A2C9WFX0
GRAS domain-containing protein; Belongs to the GRAS family.
  
     0.487
A0A2C9U126
GRAS domain-containing protein; Belongs to the GRAS family.
  
     0.486
A0A2C9WGA1
Uncharacterized protein.
  
 
  0.481
A0A2C9WDA3
AP2/ERF domain-containing protein.
  
     0.478
A0A2C9WAT3
GRAS domain-containing protein; Belongs to the GRAS family.
  
  0.477
Your Current Organism:
Manihot esculenta
NCBI taxonomy Id: 3983
Other names: M. esculenta, Manihot esculenta Crantz, Manihot utilissima, cassava, manioc, tapioca, yuca
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