STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2C9V5L4Uncharacterized protein. (531 aa)    
Predicted Functional Partners:
A0A2C9VEM8
Uncharacterized protein.
    
 0.709
A0A2C9W354
ERCC4 domain-containing protein.
    
 0.621
A0A2C9UQC0
Protein kinase domain-containing protein.
   
 0.599
A0A2C9VNB9
B5 domain-containing protein.
      
 0.574
A0A2C9UUJ6
DNA polymerase.
   
 0.562
A0A2C9V831
Small nuclear ribonucleoprotein G.
    
  0.527
A0A2C9U6C7
AA_TRNA_LIGASE_II domain-containing protein.
      
 0.521
A0A2C9UQX8
Uncharacterized protein.
   
   0.511
A0A2C9VAA5
zf-CHCC domain-containing protein.
   
   0.503
A0A2C9VGU8
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.
   
   0.502
Your Current Organism:
Manihot esculenta
NCBI taxonomy Id: 3983
Other names: M. esculenta, Manihot esculenta Crantz, Manihot utilissima, cassava, manioc, tapioca, yuca
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