STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2C9VBD5Uncharacterized protein. (219 aa)    
Predicted Functional Partners:
MANES_S033600
X8 domain-containing protein.
  
     0.483
A0A2C9VRG0
Uncharacterized protein.
  
     0.477
A0A2C9UHA8
Uncharacterized protein.
  
     0.470
A0A2C9URN9
X8 domain-containing protein.
  
     0.459
A0A2C9U4N5
Uncharacterized protein.
  
     0.452
A0A251JS03
BHLH domain-containing protein.
  
     0.443
A0A2C9U993
LOB domain-containing protein.
  
     0.439
A0A2C9VP81
BHLH domain-containing protein.
  
     0.436
A0A2C9W2W1
C2H2-type domain-containing protein.
  
     0.403
A0A2C9W586
Uncharacterized protein.
  
     0.402
Your Current Organism:
Manihot esculenta
NCBI taxonomy Id: 3983
Other names: M. esculenta, Manihot esculenta Crantz, Manihot utilissima, cassava, manioc, tapioca, yuca
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.