Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A2C9VBU7Bromo domain-containing protein. (261 aa)    
Predicted Functional Partners:
A0A2C9W821
Uncharacterized protein.
   
 0.888
A0A2C9U1C5
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
 0.884
A0A2C9V0F4
Bromo domain-containing protein.
     
  0.702
A0A2C9VVQ2
Bromo domain-containing protein.
     
  0.702
A0A2C9W0B0
Bromo domain-containing protein.
     
  0.702
A0A2C9UQH6
Uncharacterized protein.
   
 0.611
A0A2C9UT60
Uncharacterized protein.
   
 0.611
MANES_S101600
Uncharacterized protein.
     
  0.595
A0A2C9W719
Bromo domain-containing protein.
     
  0.595
A0A2C9W727
Bromo domain-containing protein.
     
  0.595
Your Current Organism:
Manihot esculenta
NCBI taxonomy Id: 3983
Other names: M. esculenta, Manihot esculenta Crantz, Manihot utilissima, cassava, manioc, tapioca, yuca
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