STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2C9VBX2Uncharacterized protein. (501 aa)    
Predicted Functional Partners:
A0A2C9TZV8
BHLH domain-containing protein.
  
     0.473
A0A2C9VWL9
BHLH domain-containing protein.
  
     0.469
A0A0M4FLN5
NAC transcription factors 12.
  
     0.468
A0A2C9UNR1
NAC domain-containing protein.
  
     0.435
A0A2C9UUE7
Uncharacterized protein.
  
     0.435
A0A251KZV3
Uncharacterized protein.
  
     0.429
A0A2C9UT84
Uncharacterized protein.
  
     0.423
A0A2C9UPD2
FAR1 domain-containing protein.
  
     0.414
A0A2C9WI12
Uncharacterized protein.
  
     0.413
A0A2C9WFN7
Uncharacterized protein.
  
     0.412
Your Current Organism:
Manihot esculenta
NCBI taxonomy Id: 3983
Other names: M. esculenta, Manihot esculenta Crantz, Manihot utilissima, cassava, manioc, tapioca, yuca
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