STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2C9VC96Uncharacterized protein. (519 aa)    
Predicted Functional Partners:
A0A2C9UTR8
Nuclear cap-binding protein subunit 2.
    
 0.580
A0A2C9VTG4
MIF4G domain-containing protein.
    
 0.565
A0A2C9VJV5
Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.
    
  0.465
A0A2C9VJF8
Uncharacterized protein.
    
   0.451
A0A2C9UMG1
RRM domain-containing protein.
   
 
 0.437
A0A2C9UIG8
Uncharacterized protein.
   
 
  0.433
A0A2C9VT80
Uncharacterized protein.
   
 
  0.433
A0A2C9UQ89
Uncharacterized protein.
   
  0.429
A0A2C9UTT0
Uncharacterized protein.
   
  0.429
A0A251LVE1
Uncharacterized protein.
   
 0.427
Your Current Organism:
Manihot esculenta
NCBI taxonomy Id: 3983
Other names: M. esculenta, Manihot esculenta Crantz, Manihot utilissima, cassava, manioc, tapioca, yuca
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