Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A2C9VF46Uncharacterized protein; Belongs to the peptidase C19 family. (1116 aa)    
Predicted Functional Partners:
A0A2C9VC76
HECT domain-containing protein.
   
 
 0.925
A0A2C9W0I1
HECT domain-containing protein.
   
 
 0.914
A0A2C9V5L3
Uncharacterized protein; Belongs to the peptidase C19 family.
     
  0.846
A0A2C9VJN7
Uncharacterized protein; Belongs to the peptidase C19 family.
     
  0.846
A0A251KKW0
Ubiquitin-like domain-containing protein.
    
  0.769
A0A2C9UI10
Ubiquitin-like domain-containing protein.
    
  0.769
A0A2C9VCG0
Uncharacterized protein.
   
 
 0.673
A0A2C9WBN7
Uncharacterized protein.
   
 
 0.673
A0A2C9UXS3
Ubiquitin carboxyl-terminal hydrolase; Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins. Belongs to the peptidase C19 family.
    
 0.650
A0A2C9V8P8
Uncharacterized protein.
   
 
 0.649
Your Current Organism:
Manihot esculenta
NCBI taxonomy Id: 3983
Other names: M. esculenta, Manihot esculenta Crantz, Manihot utilissima, cassava, manioc, tapioca, yuca
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