STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2C9VHB5BHLH domain-containing protein. (421 aa)    
Predicted Functional Partners:
A0A2C9WL46
Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 0.833
A0A2C9UQ27
PIK helical domain-containing protein.
    
 0.627
A0A2C9UWV1
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
    
 0.627
A0A2C9W4B4
Uncharacterized protein.
   
 0.617
A0A2C9WHB6
Exocyst complex component SEC5; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. Belongs to the SEC5 family.
    
 0.610
A0A251JDJ6
Uncharacterized protein.
   
 0.582
A0A2C9U075
Sec3-PIP2_bind domain-containing protein.
    
 0.544
A0A2C9VUF6
Uncharacterized protein.
  
  0.534
A0A2C9VZY6
Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX.
    
 0.533
A0A2C9UHQ3
PB1 domain-containing protein.
  
  0.524
Your Current Organism:
Manihot esculenta
NCBI taxonomy Id: 3983
Other names: M. esculenta, Manihot esculenta Crantz, Manihot utilissima, cassava, manioc, tapioca, yuca
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