STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2C9VLY3Uncharacterized protein. (91 aa)    
Predicted Functional Partners:
A0A2C9UL68
PRKCSH domain-containing protein.
   
 0.940
A0A2C9VG11
TGc domain-containing protein.
   
 0.740
A0A2C9UNH1
F-box domain-containing protein.
    
 0.730
A0A2C9UUB9
F-box domain-containing protein.
    
 0.730
A0A2C9VKI3
Uncharacterized protein.
    
 0.730
A0A2C9VLL1
Uncharacterized protein.
    
 0.730
A0A2C9VN23
Uncharacterized protein.
    
 0.730
A0A2C9U5H7
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
    
 0.713
A0A2C9U7E2
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
    
 0.713
A0A2C9U7T1
Uncharacterized protein.
    
 0.713
Your Current Organism:
Manihot esculenta
NCBI taxonomy Id: 3983
Other names: M. esculenta, Manihot esculenta Crantz, Manihot utilissima, cassava, manioc, tapioca, yuca
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