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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2C9VRR2Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). (857 aa)    
Predicted Functional Partners:
A0A2C9V0D4
TCP domain-containing protein.
  
     0.498
A0A2C9U2B2
TCP domain-containing protein.
  
     0.495
A0A2C9WI20
TCP domain-containing protein.
  
     0.490
A0A2C9WG38
NAC domain-containing protein.
  
     0.477
A0A2C9URU8
Uncharacterized protein; Belongs to the plant LTP family.
  
     0.470
A0A2C9V0Q5
TCP domain-containing protein.
  
     0.467
A0A2C9W110
TCP domain-containing protein.
  
     0.463
A0A2C9UPV5
TF-B3 domain-containing protein.
  
   
 0.452
A0A2C9WN47
NAC domain-containing protein.
  
     0.441
A0A2C9UUD8
TCP domain-containing protein.
  
     0.439
Your Current Organism:
Manihot esculenta
NCBI taxonomy Id: 3983
Other names: M. esculenta, Manihot esculenta Crantz, Manihot utilissima, cassava, manioc, tapioca, yuca
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