STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2C9VT82Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (290 aa)    
Predicted Functional Partners:
A0A2C9VHI3
Uncharacterized protein.
   
 
 0.965
A0A2C9UKP7
ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.
   
 0.935
A0A2C9VPQ4
ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.
   
 0.935
A0A251LC68
RING-type domain-containing protein.
   
 0.900
A0A2C9U3Y7
RING-type domain-containing protein.
   
 0.900
A0A2C9UC46
RING-type domain-containing protein.
   
 0.900
A0A2C9UGU2
RING-type domain-containing protein.
   
 0.900
A0A2C9W1K6
RING-type domain-containing protein.
   
 0.900
A0A2C9WMQ2
RING-type domain-containing protein.
   
 0.900
A0A2C9W181
Condensin complex subunit 2; Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes.
   
 
 0.889
Your Current Organism:
Manihot esculenta
NCBI taxonomy Id: 3983
Other names: M. esculenta, Manihot esculenta Crantz, Manihot utilissima, cassava, manioc, tapioca, yuca
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